PySeq2500
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PySeq2500:
Usage
Instruments
Illlumina HiSeq 2500 System Specifications
PySeq2500
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C
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D
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F
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G
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H
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I
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M
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U
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Z
A
allocFrame() (pyseq.dcam.HamamatsuCamera method)
Autofocus (class in pyseq.focus)
autofocus() (in module pyseq.focus)
(pyseq.__init__.HiSeq method)
autolevel() (in module pyseq.focus)
(pyseq.__init__.HiSeq method)
C
check_COM() (pyseq.__init__.HiSeq method)
check_home() (pyseq.xstage.Xstage method)
check_position() (pyseq.objstage.OBJstage method)
(pyseq.pump.Pump method)
(pyseq.xstage.Xstage method)
(pyseq.ystage.Ystage method)
(pyseq.zstage.Zstage method)
check_pump() (pyseq.pump.Pump method)
check_valve() (pyseq.valve.Valve method)
command() (pyseq.fpga.FPGA method)
(pyseq.laser.Laser method)
(pyseq.objstage.OBJstage method)
(pyseq.optics.Optics method)
(pyseq.pump.Pump method)
(pyseq.temperature.Temperature method)
(pyseq.valve.Valve method)
(pyseq.xstage.Xstage method)
(pyseq.ystage.Ystage method)
(pyseq.zstage.Zstage method)
D
DCAM_PARAM_PROPERTYATTR (class in pyseq.dcam)
DCAM_PARAM_PROPERTYVALUETEXT (class in pyseq.dcam)
DCAMException
delete_focus_images() (pyseq.focus.Autofocus method)
F
fc_off() (pyseq.temperature.Temperature method)
fc_on() (pyseq.temperature.Temperature method)
fit_mixed_gaussian() (pyseq.focus.Autofocus method)
format_focus() (pyseq.focus.Autofocus method)
FPGA (class in pyseq.fpga)
full_scan() (pyseq.focus.Autofocus method)
G
gaussian() (in module pyseq.focus)
get_chiller_T() (pyseq.temperature.Temperature method)
get_fc_index() (pyseq.temperature.Temperature method)
get_fc_T() (pyseq.temperature.Temperature method)
get_focus_data() (pyseq.focus.Autofocus method)
get_jpeg_size() (in module pyseq.focus)
get_motor_points() (pyseq.zstage.Zstage method)
get_obj_pos() (in module pyseq.focus)
get_power() (pyseq.laser.Laser method)
get_status() (pyseq.dcam.HamamatsuCamera method)
(pyseq.laser.Laser method)
getFocusStack() (pyseq.dcam.HamamatsuCamera method)
getFrameCount() (pyseq.dcam.HamamatsuCamera method)
getFrameInterval() (pyseq.dcam.HamamatsuCamera method)
getFrames() (pyseq.dcam.HamamatsuCamera method)
H
HamamatsuCamera (class in pyseq.dcam)
HCamData (class in pyseq.dcam)
HiSeq (class in pyseq.__init__)
I
in_position() (pyseq.zstage.Zstage method)
initialize() (pyseq.fpga.FPGA method)
(pyseq.laser.Laser method)
(pyseq.objstage.OBJstage method)
(pyseq.optics.Optics method)
(pyseq.pump.Pump method)
(pyseq.temperature.Temperature method)
(pyseq.valve.Valve method)
(pyseq.xstage.Xstage method)
(pyseq.ystage.Ystage method)
(pyseq.zstage.Zstage method)
initializeCams() (pyseq.__init__.HiSeq method)
initializeInstruments() (pyseq.__init__.HiSeq method)
L
Laser (class in pyseq.laser)
LED() (pyseq.fpga.FPGA method)
M
message() (pyseq.__init__.HiSeq method)
(pyseq.dcam.HamamatsuCamera method)
(pyseq.focus.Autofocus method)
module
pyseq.__init__
pyseq.dcam
pyseq.focus
pyseq.fpga
pyseq.laser
pyseq.objstage
pyseq.optics
pyseq.pump
pyseq.temperature
pyseq.valve
pyseq.xstage
pyseq.ystage
pyseq.zstage
move() (pyseq.objstage.OBJstage method)
(pyseq.valve.Valve method)
(pyseq.xstage.Xstage method)
(pyseq.ystage.Ystage method)
(pyseq.zstage.Zstage method)
move_em_in() (pyseq.optics.Optics method)
move_ex() (pyseq.optics.Optics method)
move_inlet() (pyseq.__init__.HiSeq method)
move_stage_out() (pyseq.__init__.HiSeq method)
O
obj_stack() (pyseq.__init__.HiSeq method)
OBJstage (class in pyseq.objstage)
Optics (class in pyseq.optics)
optimize_filter() (pyseq.__init__.HiSeq method)
P
partial_scan() (pyseq.focus.Autofocus method)
planeFit() (in module pyseq.focus)
position() (pyseq.__init__.HiSeq method)
Pump (class in pyseq.pump)
pump() (pyseq.pump.Pump method)
px_to_step() (pyseq.__init__.HiSeq method)
pyseq.__init__
module
pyseq.dcam
module
pyseq.focus
module
pyseq.fpga
module
pyseq.laser
module
pyseq.objstage
module
pyseq.optics
module
pyseq.pump
module
pyseq.temperature
module
pyseq.valve
module
pyseq.xstage
module
pyseq.ystage
module
pyseq.zstage
module
R
read_position() (pyseq.fpga.FPGA method)
(pyseq.ystage.Ystage method)
res_gaussian() (in module pyseq.focus)
reset_ARM9() (pyseq.temperature.Temperature method)
reset_stage() (pyseq.__init__.HiSeq method)
reverse_pump() (pyseq.pump.Pump method)
S
saveImage() (pyseq.dcam.HamamatsuCamera method)
scan() (pyseq.__init__.HiSeq method)
set_chiller_T() (pyseq.temperature.Temperature method)
set_fc_T() (pyseq.temperature.Temperature method)
set_focus_trigger() (pyseq.objstage.OBJstage method)
set_mode() (pyseq.ystage.Ystage method)
set_power() (pyseq.laser.Laser method)
set_velocity() (pyseq.objstage.OBJstage method)
setAREA() (pyseq.dcam.HamamatsuCamera method)
setTDI() (pyseq.dcam.HamamatsuCamera method)
T
take_picture() (pyseq.__init__.HiSeq method)
TDIYARM3() (pyseq.fpga.FPGA method)
TDIYPOS() (pyseq.fpga.FPGA method)
Temperature (class in pyseq.temperature)
turn_on() (pyseq.laser.Laser method)
twoscan() (pyseq.__init__.HiSeq method)
U
uLperMin_to_sps() (pyseq.pump.Pump method)
update_focus_limits() (pyseq.objstage.OBJstage method)
update_limits() (pyseq.pump.Pump method)
userYN() (in module pyseq.focus)
V
Valve (class in pyseq.valve)
vol_to_pos() (pyseq.pump.Pump method)
W
wait_fc_T() (pyseq.temperature.Temperature method)
write_log() (pyseq.objstage.OBJstage method)
(pyseq.pump.Pump method)
(pyseq.temperature.Temperature method)
(pyseq.valve.Valve method)
write_metadata() (pyseq.__init__.HiSeq method)
write_obj_pos() (in module pyseq.focus)
write_position() (pyseq.fpga.FPGA method)
X
Xstage (class in pyseq.xstage)
Y
Ystage (class in pyseq.ystage)
Z
zstack() (pyseq.__init__.HiSeq method)
Zstage (class in pyseq.zstage)
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